ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j1lC1 - ECOD Domain | ECOD

ECOD/Domains/e5j1lC1

e5j1lC1

UID: 001891426

RepresentativePDB

Range: C:140-262
PDB: 5J1L chain C(all domains)
UniProt: O26068 (all domains)
Gene: HP_1543

Molecule: ToxR-activated gene (TagE)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M23 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupDuplicated hybrid motif(325.1.6)

FFamilyPeptidase_M23(325.1.6.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01551Peptidase_M23

Peptidase family M23

ClanCL0105Hybrid

External Links

ECOD PDB View: 5J1L RCSB PDB: 5J1L PDBe: 5J1L UniProt: O26068

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure