ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g1rD1 - ECOD Domain | ECOD

ECOD/Domains/e5g1rD1

e5g1rD1

UID: 001891651

PDB

Range: D:7-198
PDB: 5G1R chain D(all domains)
UniProt: Q5NH47 (all domains)
Gene: clpP

Molecule: ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT

3D Structure

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Related Domains

Browse other domains in CLP_protease →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCLP_protease(2486.1.1.2)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD
within 5 Å only

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00574CLP_protease

Clp protease

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 5G1R RCSB PDB: 5G1R PDBe: 5G1R UniProt: Q5NH47

Downloads

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