ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5t9tB4 - ECOD Domain | ECOD

ECOD/Domains/e5t9tB4

e5t9tB4

UID: 001892299

PDB

Range: B:416-527
PDB: 5T9T chain B(all domains)
UniProt: Q8K486 (all domains)

Molecule: Protocadherin gamma B2-alpha C

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Calcium ionCA
metalwithin 5 Å only

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5T9T RCSB PDB: 5T9T PDBe: 5T9T UniProt: Q8K486

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

alpha-D-mannopyranose

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.