ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5co1B3 - ECOD Domain | ECOD

ECOD/Domains/e5co1B3

e5co1B3

UID: 001893040

PDB

Range: B:213-256
PDB: 5CO1 chain B(all domains)
UniProt: F8W3X3 (all domains)
Gene: pcdh19

Molecule: Protocadherin-19 isoform 1

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5CO1 RCSB PDB: 5CO1 PDBe: 5CO1 UniProt: F8W3X3

Downloads

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