ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5co1C1 - ECOD Domain | ECOD

ECOD/Domains/e5co1C1

e5co1C1

UID: 001893041

PDB

Range: C:258-316
PDB: 5CO1 chain C(all domains)
UniProt: F8W3X3 (all domains)
Gene: pcdh19

Molecule: Protocadherin-19 isoform 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5CO1 RCSB PDB: 5CO1 PDBe: 5CO1 UniProt: F8W3X3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure