ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ecmA3 - ECOD Domain | ECOD

ECOD/Domains/e5ecmA3

e5ecmA3

UID: 001893168

PDB

Range: A:425-575
PDB: 5ECM chain A(all domains)
UniProt: Q9SKE2 (all domains)
Gene: JAR1

Molecule: Jasmonic acid-amido synthetase JAR1

3D Structure

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Related Domains

Browse other domains in GH3_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyGH3_C(327.5.1.4)

Ligands

in contact, ≤ 4 Å

LeucineLEU
drugDrugBank DB00149
{(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetic acidJAA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

GH3 family C-terminal domain

External Links

ECOD PDB View: 5ECM RCSB PDB: 5ECM PDBe: 5ECM UniProt: Q9SKE2

Downloads

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