ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ecqD1 - ECOD Domain | ECOD

ECOD/Domains/e5ecqD1

e5ecqD1

UID: 001893225

PDB

Range: D:425-575
PDB: 5ECQ chain D(all domains)
UniProt: Q9SKE2 (all domains)
Gene: JAR1

Molecule: Jasmonic acid-amido synthetase JAR1

3D Structure

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Related Domains

Browse other domains in GH3_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyGH3_C(327.5.1.4)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
ValineVAL
drugDrugBank DB00161
{(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetic acid

Pfam Families

GH3 family C-terminal domain

External Links

ECOD PDB View: 5ECQ RCSB PDB: 5ECQ PDBe: 5ECQ UniProt: Q9SKE2

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.