ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gmfB2 - ECOD Domain | ECOD

ECOD/Domains/e5gmfB2

e5gmfB2

UID: 001893341

PDB

Range: B:24-435,B:459-469
PDB: 5GMF chain B(all domains)
UniProt: B3Y653 (all domains)
Gene: TLR7

Molecule: Toll-like receptor 7

3D Structure

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Related Domains

Browse other domains in LRR_1, LRR_5, LRR_8, LRR_12 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupLeucine-rich repeats(207.1)

TT-groupLeucine-rich repeats(207.1.1)

FFamilyLRR_1, LRR_5, LRR_8, LRR_12(207.1.1.145)

Ligands

in contact, ≤ 4 Å

GuanosineGMP
drugDrugBank DB02857
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

Leucine Rich Repeat

ClanCL0022LRR

BspA type Leucine rich repeat region (6 copies)

ClanCL0022LRR

Leucine rich repeat

ClanCL0022LRR

Leucine-rich repeat

ClanCL0022LRR

External Links

ECOD PDB View: 5GMF RCSB PDB: 5GMF PDBe: 5GMF UniProt: B3Y653

Downloads

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Drug annotations from DrugDomain.