ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iu9B1 - ECOD Domain | ECOD

ECOD/Domains/e5iu9B1

e5iu9B1

UID: 001893420

PDB

Range: B:2-99
PDB: 5IU9 chain B(all domains)
UniProt: F8W3X3 (all domains)
Gene: pcdh19

Molecule: Protocadherin-19 isoform 1

3D Structure

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Related Domains

Browse other domains in Cadherin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin_2(11.1.1.110)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

PF08266Cadherin_2

Cadherin-like

ClanCL0159E-set

External Links

ECOD PDB View: 5IU9 RCSB PDB: 5IU9 PDBe: 5IU9 UniProt: F8W3X3

Downloads

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