ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5tdrA1 - ECOD Domain | ECOD

ECOD/Domains/e5tdrA1

e5tdrA1

UID: 001893702

PDB

Range: A:0-69
PDB: 5TDR chain A(all domains)
UniProt: P36124 (all domains)
Gene: SET3

Molecule: SET domain-containing protein 3

3D Structure

Loading viewer...

Related Domains

Browse other domains in PHD_5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD_5(376.1.3.18)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PhD finger domain

ClanCL0229RING

External Links

ECOD PDB View: 5TDR RCSB PDB: 5TDR PDBe: 5TDR UniProt: P36124

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure