ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2c1lA2 - ECOD Domain | ECOD

ECOD/Domains/e2c1lA2

e2c1lA2

UID: 000189444

RepresentativePDB

Range: A:195-358
PDB: 2C1L chain A(all domains)
UniProt: Q9F4C9 (all domains)
Gene: R

Molecule: RESTRICTION ENDONUCLEASE

3D Structure

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Related Domains

Browse other domains in BfiI_DBD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupType II restriction endonuclease effector domain(1.1.11)

FFamilyBfiI_DBD(1.1.11.3)

Ligands

in contact, ≤ 4 Å

D-tartaric acidTAR
drugDrugBank DB01694

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF18243BfiI_DBD

Metal-independent restriction enzyme BfiI DNA binding domain

ClanCL0405DNA_b-psBarrel

External Links

ECOD PDB View: 2C1L RCSB PDB: 2C1L PDBe: 2C1L UniProt: Q9F4C9

Downloads

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Drug annotations from DrugDomain.