ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2aphA1 - ECOD Domain | ECOD

ECOD/Domains/e2aphA1

e2aphA1

UID: 001900460

PDB

Range: A:177-341
PDB: 2APH chain A(all domains)
UniProt: Q96LB9 (all domains)
Gene: PGLYRP3

Molecule: Peptidoglycan recognition protein I-alpha

3D Structure

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Related Domains

Browse other domains in Amidase_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupN-acetylmuramoyl-L-alanine amidase-like(285)

HH-groupN-acetylmuramoyl-L-alanine amidase-like(285.1)

TT-groupN-acetylmuramoyl-L-alanine amidase-like(285.1.1)

FFamilyAmidase_2(285.1.1.1)

Ligands

in contact, ≤ 4 Å

N-acetyl-beta-muramic acidAMU
within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01510Amidase_2

N-acetylmuramoyl-L-alanine amidase

External Links

ECOD PDB View: 2APH RCSB PDB: 2APH PDBe: 2APH UniProt: Q96LB9

Downloads

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