ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e5oC1 - ECOD Domain | ECOD

ECOD/Domains/e4e5oC1

e4e5oC1

UID: 001900829

PDB

Range: C:21-300
PDB: 4E5O chain C(all domains)
UniProt: P07607 (all domains)
Gene: Tyms

Molecule: Thymidylate synthase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

Deoxyuridine monophosphateUMP
drugDrugBank DB03800

+ 1 additive (1,4-Butanediol)

1,4-ButanediolBU1
DrugBank DB01955

Shown in the structure viewer.

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 4E5O RCSB PDB: 4E5O PDBe: 4E5O UniProt: P07607

Downloads

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Drug annotations from DrugDomain.