ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4eb4A1 - ECOD Domain | ECOD

ECOD/Domains/e4eb4A1

e4eb4A1

UID: 001900846

PDB

Range: A:1-307
PDB: 4EB4 chain A(all domains)
UniProt: P07607 (all domains)
Gene: Tyms

Molecule: Thymidylate synthase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

RaltitrexedD16
drugDrugBank DB00293
1,4-DithiothreitolDTT
drugDrugBank DB04447
Deoxyuridine monophosphate

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 4EB4 RCSB PDB: 4EB4 PDBe: 4EB4 UniProt: P07607

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03800

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.