ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gg5D1 - ECOD Domain | ECOD

ECOD/Domains/e3gg5D1

e3gg5D1

UID: 001901158

PDB

Range: D:26-308
PDB: 3GG5 chain D(all domains)
UniProt: P04818 (all domains)
Gene: TYMS

Molecule: Thymidylate synthase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Sulfate ion)

Phosphate ionPO4
DrugBank DB14523
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 3GG5 RCSB PDB: 3GG5 PDBe: 3GG5 UniProt: P04818

Downloads

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