ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4m5jA1 - ECOD Domain | ECOD

ECOD/Domains/e4m5jA1

e4m5jA1

UID: 001902185

PDB

Range: A:0-158
PDB: 4M5J chain A(all domains)
UniProt: P26281 (all domains)
Gene: folK

Molecule: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in HPPK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45)

TT-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45.1)

FFamilyHPPK(304.45.1.1)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Chloride ionCL
Magnesium ionMG

Pfam Families

7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)

External Links

ECOD PDB View: 4M5J RCSB PDB: 4M5J PDBe: 4M5J UniProt: P26281

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

2-amino-8-{[2-(4-methoxyphenyl)-2-oxoethyl]sulfanyl}-1,9-dihydro-6H-purin-6-oneYH5

Shown in the structure viewer. Drug annotations from DrugDomain.