ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3tm4B1 - ECOD Domain | ECOD

ECOD/Domains/e3tm4B1

e3tm4B1

UID: 001903517

PDB

Range: B:183-365
PDB: 3TM4 chain B(all domains)
UniProt: Q8U248 (all domains)
Gene: trm14

Molecule: tRNA (guanine N2-)-methyltransferase Trm14

3D Structure

Loading viewer...

Related Domains

Browse other domains in UPF0020 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUPF0020(2003.1.5.5)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01170UPF0020

RMKL-like, methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3TM4 RCSB PDB: 3TM4 PDBe: 3TM4 UniProt: Q8U248

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure