ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vbiA1 - ECOD Domain | ECOD

ECOD/Domains/e1vbiA1

e1vbiA1

UID: 001903770

PDB

Range: A:1-340
PDB: 1VBI chain A(all domains)
UniProt: Q53W84 (all domains)
Gene: TTHB078

Molecule: Type 2 malate/lactate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Ldh_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupL-sulfolactate dehydrogenase-like(276)

HH-groupL-sulfolactate dehydrogenase-like(276.1)

TT-groupL-sulfolactate dehydrogenase-like(276.1.1)

FFamilyLdh_2(276.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Malate/L-lactate dehydrogenase

External Links

ECOD PDB View: 1VBI RCSB PDB: 1VBI PDBe: 1VBI UniProt: Q53W84

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.