ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5abmA2 - ECOD Domain | ECOD

ECOD/Domains/e5abmA2

e5abmA2

UID: 001904251

PDB

Range: A:7-270
PDB: 5ABM chain A(all domains)
UniProt: P51977 (all domains)
Gene: ALDH1A1

Molecule: RETINAL DEHYDROGENASE 1

3D Structure

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Related Domains

Browse other domains in Aldedh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupALDH-like(7524)

HH-groupALDH-like(7524.1)

TT-groupALDH-like(7524.1.1)

FFamilyAldedh(7524.1.1.1)

Ligands

in contact, ≤ 4 Å

[[(2R,3S,4R,5R)-5-[(3R)-3-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphateTXE
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

Aldehyde dehydrogenase family

ClanCL0099ALDH-like

External Links

ECOD PDB View: 5ABM RCSB PDB: 5ABM PDBe: 5ABM UniProt: P51977

Downloads

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Drug annotations from DrugDomain.