ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xscB1 - ECOD Domain | ECOD

ECOD/Domains/e4xscB1

e4xscB1

UID: 001904308

PDB

Range: B:12-295
PDB: 4XSC chain B(all domains)
UniProt: Q4JQW2 (all domains)
Gene: ORF13

Molecule: Thymidylate synthase

3D Structure

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Related Domains

Browse other domains in Thymidylat_synt →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThymidylate synthase/dCMP hydroxymethylase(266)

HH-groupThymidylate synthase/dCMP hydroxymethylase(266.1)

TT-groupThymidylate synthase/dCMP hydroxymethylase(266.1.1)

FFamilyThymidylat_synt(266.1.1.1)

Ligands

in contact, ≤ 4 Å

Brivudine monophosphateBVP
drugDrugBank DB04438

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00303Thymidylat_synt

Thymidylate synthase

External Links

ECOD PDB View: 4XSC RCSB PDB: 4XSC PDBe: 4XSC UniProt: Q4JQW2

Downloads

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