ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bw4B1 - ECOD Domain | ECOD

ECOD/Domains/e5bw4B1

e5bw4B1

UID: 001904509

PDB

Range: B:6-229
PDB: 5BW4 chain B(all domains)
UniProt: C7Q5P8 (all domains)
Gene: Caci_9046

Molecule: 16S rRNA (adenine(1408)-N(1))-methyltransferase

3D Structure

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Related Domains

Browse other domains in NpmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyNpmA(2003.1.5.142)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

16S rRNA (adenine(1408)-N(1))-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5BW4 RCSB PDB: 5BW4 PDBe: 5BW4 UniProt: C7Q5P8

Downloads

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