ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5etrA1 - ECOD Domain | ECOD

ECOD/Domains/e5etrA1

e5etrA1

UID: 001904891

PDB

Range: A:1-157
PDB: 5ETR chain A(all domains)
UniProt: Q2G0Q5 (all domains)
Gene: SAOUHSC_00491

Molecule: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in HPPK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45)

TT-group6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK(304.45.1)

FFamilyHPPK(304.45.1.1)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
2-azanyl-8-[(4-fluorophenyl)methylsulfanyl]-1,7-dihydropurin-6-one5RW
Chloride ion

Pfam Families

7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)

External Links

ECOD PDB View: 5ETR RCSB PDB: 5ETR PDBe: 5ETR UniProt: Q2G0Q5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.