ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ldlA1 - ECOD Domain | ECOD

ECOD/Domains/e5ldlA1

e5ldlA1

UID: 001905722

PDB

Range: A:2-100
PDB: 5LDL chain A(all domains)
UniProt: P07567 (all domains)
Gene: gag

Molecule: myristoylated M-PMV matrix protein mutant

3D Structure

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Related Domains

Browse other domains in Gag_p10 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRetroviral matrix proteins(612)

HH-groupRetroviral matrix proteins(612.1)

TT-groupRetroviral matrix proteins(612.1.1)

FFamilyGag_p10(612.1.1.4)

Ligands

in contact, ≤ 4 Å

Myristic acidMYR
drugDrugBank DB08231

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02337Gag_p10

Retroviral GAG p10 protein

ClanCL0074Matrix

External Links

ECOD PDB View: 5LDL RCSB PDB: 5LDL PDBe: 5LDL UniProt: P07567

Downloads

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