ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d76A1 - ECOD Domain | ECOD

ECOD/Domains/e5d76A1

e5d76A1

UID: 001905740

PDB

Range: A:3-148
PDB: 5D76 chain A(all domains)
UniProt: M1PKZ3 (all domains)

Molecule: Putative phage lysin

3D Structure

Loading viewer...

Related Domains

Browse other domains in CHAP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCHAP(219.1.1.28)

Ligands

in contact, ≤ 4 Å

L-alanyl-D-alpha-glutamine58B
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CHAP domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5D76 RCSB PDB: 5D76 PDBe: 5D76 UniProt: M1PKZ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure