ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d76B2 - ECOD Domain | ECOD

ECOD/Domains/e5d76B2

e5d76B2

UID: 001905743

PDB

Range: B:2-148
PDB: 5D76 chain B(all domains)
UniProt: M1PKZ3 (all domains)

Molecule: Putative phage lysin

3D Structure

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Related Domains

Browse other domains in CHAP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCHAP(219.1.1.28)

Ligands

in contact, ≤ 4 Å

L-alanyl-D-alpha-glutamine58B
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CHAP domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5D76 RCSB PDB: 5D76 PDBe: 5D76 UniProt: M1PKZ3

Downloads

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