ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5e5uD1 - ECOD Domain | ECOD

ECOD/Domains/e5e5uD1

e5e5uD1

UID: 001905847

PDB

Range: D:118-201
PDB: 5E5U chain D(all domains)
UniProt: Q9JMB8 (all domains)
Gene: Cntn6

Molecule: Contactin-6

3D Structure

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Related Domains

Browse other domains in Ig_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_3(11.1.1.179)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetic acid, Malonate Ion, D-Malic acid)

Acetic acidACY
DrugBank DB03166
Malonate IonMLI
DrugBank DB02201
D-Malic acid

Pfam Families

Immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5E5U RCSB PDB: 5E5U PDBe: 5E5U UniProt: Q9JMB8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03499

Shown in the structure viewer. Drug annotations from DrugDomain.