ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kpcB1 - ECOD Domain | ECOD

ECOD/Domains/e5kpcB1

e5kpcB1

UID: 001905994

PDB

Range: B:25-356
PDB: 5KPC chain B(all domains)
UniProt: C3SBW0 (all domains)
Gene: PavNMT

Molecule: Pavine N-methyltransferase

3D Structure

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Related Domains

Browse other domains in CMAS, Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCMAS, Methyltransf_25(2003.1.5.152)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Mycolic acid cyclopropane synthetase

ClanCL0063NADP_Rossmann

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KPC RCSB PDB: 5KPC PDBe: 5KPC UniProt: C3SBW0

Downloads

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