ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5la1A1 - ECOD Domain | ECOD

ECOD/Domains/e5la1A1

e5la1A1

UID: 001906133

PDB

Range: A:362-516
PDB: 5LA1 chain A(all domains)
UniProt: A3DHG6 (all domains)
Gene: Cthe_2193

Molecule: Carbohydrate binding family 6

3D Structure

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Related Domains

Browse other domains in CBM_6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM_6(10.32.1.12)

Ligands

in contact, ≤ 4 Å

Tris-hydroxymethyl-methyl-ammonium144
Calcium ionCA
metal
beta-D-xylopyranoseXYP
within 5 Å only

Shown in the structure viewer.

Pfam Families

Carbohydrate binding module (family 6)

ClanCL0202GBD

External Links

ECOD PDB View: 5LA1 RCSB PDB: 5LA1 PDBe: 5LA1 UniProt: A3DHG6

Downloads

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Drug annotations from DrugDomain.