ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b47B1 - ECOD Domain | ECOD

ECOD/Domains/e5b47B1

e5b47B1

UID: 001906302

PDB

Range: B:8-304
PDB: 5B47 chain B(all domains)
UniProt: Q96XT4 (all domains)
Gene: ST2433

Molecule: 2-oxoacid--ferredoxin oxidoreductase beta subunit

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_C,PFO_beta_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_C,PFO_beta_C(7574.1.1.6)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
Magnesium ionMG
metal
Iron/sulfur clusterSF4

Pfam Families

PF02775TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

ClanCL0254THDP-binding

PF12367PFO_beta_C

Pyruvate ferredoxin oxidoreductase beta subunit C terminal

External Links

ECOD PDB View: 5B47 RCSB PDB: 5B47 PDBe: 5B47 UniProt: Q96XT4

Downloads

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Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.