ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5htlB1 - ECOD Domain | ECOD

ECOD/Domains/e5htlB1

e5htlB1

UID: 001906334

PDB

Range: B:64-145
PDB: 5HTL chain B(all domains)
UniProt: Q9KUV7 (all domains)
Gene: VC_0405

Molecule: MSHA biogenesis protein MshE

3D Structure

Loading viewer...

Related Domains

Browse other domains in MshEN →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupGSPII protein E N-terminal domain-like(327.8)

TT-groupGSPII protein E N-terminal domain-like(327.8.1)

FFamilyMshEN(327.8.1.1)

Ligands

in contact, ≤ 4 Å

9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)C2E

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

MshEN domain

ClanCL0793GspE_N-like

External Links

ECOD PDB View: 5HTL RCSB PDB: 5HTL PDBe: 5HTL UniProt: Q9KUV7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure