ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kn7B1 - ECOD Domain | ECOD

ECOD/Domains/e5kn7B1

e5kn7B1

UID: 001906421

PDB

Range: B:9-327
PDB: 5KN7 chain B(all domains)
UniProt: S3TFW2 (all domains)

Molecule: Lipid A biosynthesis lauroyl acyltransferase

3D Structure

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Related Domains

Browse other domains in Lip_A_acyltrans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupGlycerol-3-phosphate (1)-acyltransferase(7558)

HH-groupGlycerol-3-phosphate (1)-acyltransferase(7558.1)

TT-groupGlycerol-3-phosphate (1)-acyltransferase(7558.1.1)

FFamilyLip_A_acyltrans(7558.1.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 4 additives (Glycerin, Phosphate ion, Sulfate ion, …)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4

Pfam Families

PF03279Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

ClanCL0228Acyltransferase

External Links

ECOD PDB View: 5KN7 RCSB PDB: 5KN7 PDBe: 5KN7 UniProt: S3TFW2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Sulfate ionSO4

DrugBank DB14546

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.