ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kvsA2 - ECOD Domain | ECOD

ECOD/Domains/e5kvsA2

e5kvsA2

UID: 001906431

PDB

Range: A:128-283
PDB: 5KVS chain A(all domains)
UniProt: A0A0T9SSV9 (all domains)

Molecule: Irp3 protein

3D Structure

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Related Domains

Browse other domains in Irp3-like_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyIrp3-like_C(298.1.1.21)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
(4~{R})-2-[2-(2-hydroxyphenyl)-1,3-thiazol-4-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid6XR

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Pfam Families

PF21390Irp3-like_C

Thiazolinyl imine reductase Irp3-like, C-terminal

External Links

ECOD PDB View: 5KVS RCSB PDB: 5KVS PDBe: 5KVS UniProt: A0A0T9SSV9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acidFMT

DrugBank DB01942

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.