ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j1mC1 - ECOD Domain | ECOD

ECOD/Domains/e5j1mC1

e5j1mC1

UID: 001907153

PDB

Range: C:140-262
PDB: 5J1M chain C(all domains)
UniProt: O26068 (all domains)
Gene: HP_1543

Molecule: ToxR-activated gene (TagE)

3D Structure

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Related Domains

Browse other domains in Peptidase_M23 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupDuplicated hybrid motif(325.1.6)

FFamilyPeptidase_M23(325.1.6.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01551Peptidase_M23

Peptidase family M23

ClanCL0105Hybrid

External Links

ECOD PDB View: 5J1M RCSB PDB: 5J1M PDBe: 5J1M UniProt: O26068

Downloads

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