ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5loqC1 - ECOD Domain | ECOD

ECOD/Domains/e5loqC1

e5loqC1

UID: 001907360

PDB

Range: C:3-137
PDB: 5LOQ chain C(all domains)
UniProt: Q8Y5F1 (all domains)
Gene: chdC

Molecule: Putative heme-dependent peroxidase lmo2113

3D Structure

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Related Domains

Browse other domains in Chlor_dismutase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyChlor_dismutase(304.4.1.9)

Ligands

in contact, ≤ 4 Å

1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEXFEC
Sodium ionNA
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

PF06778Chlor_dismutase

Chlorite dismutase

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 5LOQ RCSB PDB: 5LOQ PDBe: 5LOQ UniProt: Q8Y5F1

Downloads

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DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.