ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rx1B1 - ECOD Domain | ECOD

ECOD/Domains/e4rx1B1

e4rx1B1

UID: 001914150

PDB

Range: B:1-198,B:203-214
PDB: 4RX1 chain B(all domains)
UniProt: B2L3G9 (all domains)
Gene: kmr

Molecule: Putative rRNA methyltransferase

3D Structure

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Related Domains

Browse other domains in NpmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyNpmA(2003.1.5.142)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

16S rRNA (adenine(1408)-N(1))-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4RX1 RCSB PDB: 4RX1 PDBe: 4RX1 UniProt: B2L3G9

Downloads

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