ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ieeB2 - ECOD Domain | ECOD

ECOD/Domains/e5ieeB2

e5ieeB2

UID: 001914493

PDB

Range: B:30-66
PDB: 5IEE chain B(all domains)
UniProt: O08795 (all domains)
Gene: Prkcsh

Molecule: Glucosidase 2 subunit beta

3D Structure

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Related Domains

Browse other domains in PRKCSH-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyPRKCSH-like(389.3.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Hexaethylene glycolP6G

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT

Pfam Families

PF12999PRKCSH-like

Glucosidase II beta subunit-like

External Links

ECOD PDB View: 5IEE RCSB PDB: 5IEE PDBe: 5IEE UniProt: O08795

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.