ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ivfB1 - ECOD Domain | ECOD

ECOD/Domains/e2ivfB1

e2ivfB1

UID: 001915957

RepresentativePDB

Range: B:152-210
PDB: 2IVF chain B(all domains)
UniProt: Q5P5I1 (all domains)
Gene: ebdB

Molecule: ETHYLBENZENE DEHYDROGENASE BETA-SUBUNIT

3D Structure

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Related Domains

Browse other domains in Fer4_2+Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_2+Fer4_11(205.1.1.37)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
FE3-S4 CLUSTERF3S
Iron/sulfur clusterSF4

+ 1 additive (Glycerin)

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 2IVF RCSB PDB: 2IVF PDBe: 2IVF UniProt: Q5P5I1

Downloads

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GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.