ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jiaM1 - ECOD Domain | ECOD

ECOD/Domains/e5jiaM1

e5jiaM1

UID: 001917078

PDB

Range: M:29-213
PDB: 5JIA chain M(all domains)
UniProt: Q6VN19 (all domains)
Gene: Ranbp10

Molecule: Ran-binding protein 10

3D Structure

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Related Domains

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Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySPRY(10.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SPRY domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5JIA RCSB PDB: 5JIA PDBe: 5JIA UniProt: Q6VN19

Downloads

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