ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k8tA2 - ECOD Domain | ECOD

ECOD/Domains/e5k8tA2

e5k8tA2

UID: 001917167

PDB

Range: A:173-319
PDB: 5K8T chain A(all domains)
UniProt: A0A146CJG7 (all domains)

Molecule: ZIKV NS3 helicase

3D Structure

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Related Domains

Browse other domains in Flavi_DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyFlavi_DEAD(2004.1.1.151)

Ligands

in contact, ≤ 4 Å

5'-Guanosine-Diphosphate-MonothiophosphateGSP
drugDrugBank DB01864
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07652Flavi_DEAD

Flavivirus DEAD domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5K8T RCSB PDB: 5K8T PDBe: 5K8T UniProt: A0A146CJG7

Downloads

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