ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5l5wY1 - ECOD Domain | ECOD

ECOD/Domains/e5l5wY1

e5l5wY1

UID: 001917848

PDB

Range: Y:1-211
PDB: 5L5W chain Y(all domains)
UniProt: P30656 (all domains)
Gene: PRE2

Molecule: Proteasome subunit beta type-5,Proteasome subunit beta type-5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 5L5W RCSB PDB: 5L5W PDBe: 5L5W UniProt: P30656

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure