ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m12A1 - ECOD Domain | ECOD

ECOD/Domains/e5m12A1

e5m12A1

UID: 001918385

PDB

Range: A:178-525
PDB: 5M12 chain A(all domains)
UniProt: G4FEF4 (all domains)
Gene: galA

Molecule: Alpha-galactosidase

3D Structure

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Related Domains

Browse other domains in Melibiase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMelibiase(2002.1.1.87)

Ligands

in contact, ≤ 4 Å

(1~{R},2~{S},3~{S},4~{R},5~{S},6~{S})-5-[3,5-bis(fluoranyl)phenoxy]-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4-triol7D0
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF02065Melibiase

Melibiase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5M12 RCSB PDB: 5M12 PDBe: 5M12 UniProt: G4FEF4

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.