ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5eqwE1 - ECOD Domain | ECOD

ECOD/Domains/e5eqwE1

e5eqwE1

UID: 001918693

PDB

Range: E:10-132
PDB: 5EQW chain E(all domains)
UniProt: A0A125SJ78 (all domains)

Molecule: Putative major coat protein

3D Structure

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Related Domains

Browse other domains in RIP_P131-like →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHistidine-containing phosphotransfer domain, HPT domain(601.3)

TT-groupHistidine-containing phosphotransfer domain, HPT domain(601.3.1)

FFamilyRIP_P131-like(601.3.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22238RIP_P131-like

RIP/P131 family

External Links

ECOD PDB View: 5EQW RCSB PDB: 5EQW PDBe: 5EQW UniProt: A0A125SJ78

Downloads

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