ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tvgF2 - ECOD Domain | ECOD

ECOD/Domains/e5tvgF2

e5tvgF2

UID: 001919178

PDB

Range: F:227-460
PDB: 5TVG chain F(all domains)
UniProt: A4JGS8 (all domains)
Gene: Bcep1808_2483

Molecule: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)

3D Structure

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Related Domains

Browse other domains in Glyco_transf_20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_20(7512.1.1.6)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00982Glyco_transf_20

Glycosyltransferase family 20

ClanCL0113GT-B

External Links

ECOD PDB View: 5TVG RCSB PDB: 5TVG PDBe: 5TVG UniProt: A4JGS8

Downloads

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Drug annotations from DrugDomain.