ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ae4B1 - ECOD Domain | ECOD

ECOD/Domains/e4ae4B1

e4ae4B1

UID: 001919429

PDB

Range: B:386-430
PDB: 4AE4 chain B(all domains)
UniProt: Q9NZ09 (all domains)
Gene: UBAP1

Molecule: UBIQUITIN-ASSOCIATED PROTEIN 1

3D Structure

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Related Domains

Browse other domains in UBA_9 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_9(103.1.1.29)

Ligands

in contact, ≤ 4 Å

N-cyclohexyltaurineNHE
drugDrugBank DB03309
Potassium ionK
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

UBA-like domain

ClanCL0214UBA

External Links

ECOD PDB View: 4AE4 RCSB PDB: 4AE4 PDBe: 4AE4 UniProt: Q9NZ09

Downloads

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