ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lrbA1 - ECOD Domain | ECOD

ECOD/Domains/e4lrbA1

e4lrbA1

UID: 001919812

PDB

Range: A:2-100,A:218-392
PDB: 4LRB chain A(all domains)
UniProt: Q818Z9 (all domains)
Gene: deoB

Molecule: Phosphopentomutase

3D Structure

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Related Domains

Browse other domains in Metalloenzyme →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAlkaline phosphatase-like(7515)

HH-groupAlkaline phosphatase-like(7515.1)

TT-groupAlkaline phosphatase-like(7515.1.1)

FFamilyMetalloenzyme(7515.1.1.8)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
Glycerin

Pfam Families

PF01676Metalloenzyme

Metalloenzyme superfamily

ClanCL0088Alk_phosphatase

External Links

ECOD PDB View: 4LRB RCSB PDB: 4LRB PDBe: 4LRB UniProt: Q818Z9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.