ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tm5B1 - ECOD Domain | ECOD

ECOD/Domains/e3tm5B1

e3tm5B1

UID: 001920007

PDB

Range: B:185-365
PDB: 3TM5 chain B(all domains)
UniProt: Q8U248 (all domains)
Gene: trm14

Molecule: Crystal structure of Trm14

3D Structure

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Related Domains

Browse other domains in UPF0020 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUPF0020(2003.1.5.5)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01170UPF0020

RMKL-like, methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3TM5 RCSB PDB: 3TM5 PDBe: 3TM5 UniProt: Q8U248

Downloads

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