ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j4nB1 - ECOD Domain | ECOD

ECOD/Domains/e5j4nB1

e5j4nB1

UID: 001920947

PDB

Range: B:6-441
PDB: 5J4N chain B(all domains)
UniProt: P60063 (all domains)
Gene: adiC

Molecule: Arginine/agmatine antiporter

3D Structure

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Related Domains

Browse other domains in AA_permease_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyAA_permease_2(5051.1.1.10)

Ligands

in contact, ≤ 4 Å

AgmatineAG2
drugDrugBank DB08838

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13520AA_permease_2

Amino acid permease

ClanCL0062APC

External Links

ECOD PDB View: 5J4N RCSB PDB: 5J4N PDBe: 5J4N UniProt: P60063

Downloads

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