ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5t4dD1 - ECOD Domain | ECOD

ECOD/Domains/e5t4dD1

e5t4dD1

UID: 001921030

PDB

Range: D:216-243,D:464-694
PDB: 5T4D chain D(all domains)
UniProt: Q13563 (all domains)
Gene: PKD2

Molecule: hPKD:198-703, Polycystin-2

3D Structure

Loading viewer...

Related Domains

Browse other domains in PKD_channel →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyPKD_channel(5054.1.1.9)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08016PKD_channel

Polycystin cation channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5T4D RCSB PDB: 5T4D PDBe: 5T4D UniProt: Q13563

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure