ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lnk91 - ECOD Domain | ECOD

ECOD/Domains/e5lnk91

e5lnk91

UID: 001921069

PDB

Range: 9:1-176
PDB: 5LNK chain 9(all domains)
UniProt: P42028 (all domains)
Gene: NDUFS8

Molecule: Mitochondrial complex I, TYKY subunit

3D Structure

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Related Domains

Browse other domains in Fer4+Fer4_7 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4+Fer4_7(205.1.1.35)

Ligands

in contact, ≤ 4 Å

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
CardiolipinCDL
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 5LNK RCSB PDB: 5LNK PDBe: 5LNK UniProt: P42028

Downloads

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