ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tisx1 - ECOD Domain | ECOD

ECOD/Domains/e5tisx1

e5tisx1

UID: 001922169

PDB

Range: x:2-39
PDB: 5TIS chain x(all domains)
UniProt: Q9F1R6 (all domains)
Gene: psbX

Molecule: Photosystem II reaction center X protein

3D Structure

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Related Domains

Browse other domains in PsbX →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II PsbX protein(3493)

HH-groupPhotosystem II PsbX protein(3493.1)

TT-groupPhotosystem II PsbX protein(3493.1.1)

FFamilyPsbX(3493.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

Pfam Families

Photosystem II reaction centre X protein (PsbX)

External Links

ECOD PDB View: 5TIS RCSB PDB: 5TIS PDBe: 5TIS UniProt: Q9F1R6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Unknown ligandUNL

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

within 5 Å only

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.